Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gm18018-201ENSMUST00000198273 408 ntBASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.86□□□□□ -0.51
Ssmem1Q9D9Y8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Mir6392-201ENSMUST00000184924 108 ntBASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ssmem1Q9D9Y8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Gm11524-201ENSMUST00000119349 807 ntBASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Gm12341-201ENSMUST00000119724 503 ntBASIC11.84□□□□□ -0.51
Ssmem1Q9D9Y8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms