Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bl1Q9D701 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3bl1Q9D701 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bl1Q9D701 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bl1Q9D701 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Upk3bl1Q9D701 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Gm11764-201ENSMUST00000120221 623 ntBASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Gm22119-201ENSMUST00000175594 99 ntBASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bl1Q9D701 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm14542-201ENSMUST00000118460 1248 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm27357-201ENSMUST00000183754 135 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44357-201ENSMUST00000195897 142 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm19658-201ENSMUST00000196231 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44367-201ENSMUST00000196836 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44350-201ENSMUST00000197197 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44390-201ENSMUST00000197533 144 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44313-201ENSMUST00000198018 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44486-201ENSMUST00000198508 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44314-201ENSMUST00000199263 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44394-201ENSMUST00000199558 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44484-201ENSMUST00000199873 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44466-201ENSMUST00000200264 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm44359-201ENSMUST00000200671 138 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm35638-201ENSMUST00000220724 652 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bl1Q9D701 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bl1Q9D701 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms