Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp48Q9D361 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Snrnp48Q9D361 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Snrnp48Q9D361 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Snrnp48Q9D361 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp48Q9D361 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp48Q9D361 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gm14057-201ENSMUST00000120631 482 ntBASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gm17795-201ENSMUST00000214505 757 ntBASIC13.7□□□□□ -0.22
Snrnp48Q9D361 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.7□□□□□ -0.22
Snrnp48Q9D361 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Gm15321-201ENSMUST00000121290 288 ntBASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Snrnp48Q9D361 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Syt7-204ENSMUST00000223586 1344 ntBASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.68□□□□□ -0.22
Snrnp48Q9D361 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms