Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim42Q9D2H5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim42Q9D2H5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim42Q9D2H5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim42Q9D2H5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trim42Q9D2H5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Gm7862-201ENSMUST00000121461 292 ntBASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Gm2445-201ENSMUST00000182798 989 ntBASIC13.74□□□□□ -0.21
Trim42Q9D2H5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim42Q9D2H5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Gm13036-201ENSMUST00000117799 748 ntBASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Gm11434-201ENSMUST00000122379 629 ntBASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.73□□□□□ -0.21
Trim42Q9D2H5 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Thap2-203ENSMUST00000218989 527 ntBASIC13.73□□□□□ -0.21
Trim42Q9D2H5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim42Q9D2H5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms