Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Mir5126-201ENSMUST00000175513 77 ntBASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Mir8098-201ENSMUST00000184011 137 ntBASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Hdhd3Q9CYW4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hdhd3Q9CYW4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hdhd3Q9CYW4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hdhd3Q9CYW4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Hdhd3Q9CYW4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hdhd3Q9CYW4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm13884-201ENSMUST00000118103 829 ntBASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm17968-201ENSMUST00000194902 784 ntBASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hdhd3Q9CYW4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms