Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gm7488-201ENSMUST00000117148 684 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gm14042-201ENSMUST00000120139 833 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gm24694-201ENSMUST00000180054 110 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gm27663-201ENSMUST00000184839 110 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Gm20445-201ENSMUST00000061905 565 ntBASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sft2d3Q9CSV6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 BC001981-202ENSMUST00000191393 1545 ntBASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sft2d3Q9CSV6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms