Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Mir5126-201ENSMUST00000175513 77 ntBASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 AW822252-206ENSMUST00000208904 237 ntBASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Gm29741-201ENSMUST00000192667 421 ntBASIC12.36□□□□□ -0.43
Krt88Q9CPR6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Gm43514-201ENSMUST00000198852 424 ntBASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.36□□□□□ -0.43
Krt88Q9CPR6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Krt88Q9CPR6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gm18206-201ENSMUST00000207027 926 ntBASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms