Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim11Q99PQ2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Gm6888-201ENSMUST00000221983 706 ntBASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trim11Q99PQ2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.64■□□□□ 0.09
Trim11Q99PQ2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gm27321-201ENSMUST00000185021 205 ntBASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gm38294-201ENSMUST00000192831 381 ntBASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Rubie-203ENSMUST00000227803 2430 ntBASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim11Q99PQ2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm13616-201ENSMUST00000120600 222 ntBASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm17837-201ENSMUST00000186435 985 ntBASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm43703-201ENSMUST00000200523 763 ntBASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms