Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm25700-201ENSMUST00000177693 110 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm8365-201ENSMUST00000197334 648 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm44262-201ENSMUST00000204969 372 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm5950-201ENSMUST00000213337 772 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Cdh23Q99PF4 Gm44405-201ENSMUST00000198952 126 ntBASIC13.65□□□□□ -0.23
Cdh23Q99PF4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.65□□□□□ -0.23
Cdh23Q99PF4 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.23
Cdh23Q99PF4 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.65□□□□□ -0.23
Cdh23Q99PF4 Spcs1-203ENSMUST00000226374 592 ntBASIC13.65□□□□□ -0.23
Cdh23Q99PF4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdh23Q99PF4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gm19353-201ENSMUST00000184561 445 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.64□□□□□ -0.23
Cdh23Q99PF4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.64□□□□□ -0.23
Cdh23Q99PF4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm16202-201ENSMUST00000117532 544 ntBASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm20392-201ENSMUST00000173047 701 ntBASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm27046-201ENSMUST00000182160 463 ntBASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm31256-201ENSMUST00000194705 506 ntBASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms