Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Gm15460-201ENSMUST00000118147 391 ntBASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Gm27533-201ENSMUST00000183800 152 ntBASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Shd-206ENSMUST00000225145 998 ntBASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cstf3Q99LI7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.27□□□□□ -0.28
Cstf3Q99LI7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Gm26308-201ENSMUST00000157768 69 ntBASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Gm9229-201ENSMUST00000222777 126 ntBASIC13.27□□□□□ -0.29
Cstf3Q99LI7 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cstf3Q99LI7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Mir698-201ENSMUST00000102164 109 ntBASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Gm21470-201ENSMUST00000187680 696 ntBASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Gm43575-201ENSMUST00000196420 516 ntBASIC13.26□□□□□ -0.29
Cstf3Q99LI7 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Mir497b-201ENSMUST00000093601 125 ntBASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms