Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Gm10253-201ENSMUST00000194270 940 ntBASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Gm5779-201ENSMUST00000218467 910 ntBASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb4Q91XZ6 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Gm6736-201ENSMUST00000166583 948 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Gm27702-201ENSMUST00000184512 56 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Gm5312-201ENSMUST00000203728 547 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Dupd1-202ENSMUST00000224735 548 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb4Q91XZ6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Pcdhb4Q91XZ6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms