Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Gm14057-201ENSMUST00000120631 482 ntBASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Gm29741-201ENSMUST00000192667 421 ntBASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Gm16476-201ENSMUST00000221544 139 ntBASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Dupd1-202ENSMUST00000224735 548 ntBASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga11Q91XY8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Gm24543-201ENSMUST00000103867 82 ntBASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Gm15693-201ENSMUST00000120470 637 ntBASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga11Q91XY8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms