Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.54□□□□□ -0.24
Vsx1Q91V10 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Gm13385-201ENSMUST00000121089 220 ntBASIC13.54□□□□□ -0.24
Vsx1Q91V10 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Proscos-202ENSMUST00000178990 666 ntBASIC13.54□□□□□ -0.24
Vsx1Q91V10 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.54□□□□□ -0.24
Vsx1Q91V10 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.54□□□□□ -0.24
Vsx1Q91V10 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Cts7-204ENSMUST00000225321 1257 ntBASIC13.54□□□□□ -0.24
Vsx1Q91V10 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vsx1Q91V10 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm12485-201ENSMUST00000119641 291 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm29705-201ENSMUST00000212598 474 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm18027-201ENSMUST00000218947 619 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vsx1Q91V10 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.53□□□□□ -0.24
Vsx1Q91V10 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vsx1Q91V10 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vsx1Q91V10 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vsx1Q91V10 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vsx1Q91V10 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vsx1Q91V10 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms