Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx39aQ8VDW0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx39aQ8VDW0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx39aQ8VDW0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.21■□□□□ 0.03
Ddx39aQ8VDW0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx39aQ8VDW0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx39aQ8VDW0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx39aQ8VDW0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx39aQ8VDW0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx39aQ8VDW0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx39aQ8VDW0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx39aQ8VDW0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
Ddx39aQ8VDW0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Mir1982-201ENSMUST00000157368 74 ntBASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx39aQ8VDW0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm15770-201ENSMUST00000117498 584 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm11814-201ENSMUST00000119515 929 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm27847-201ENSMUST00000183711 107 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm27375-201ENSMUST00000183799 107 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Gm6091-201ENSMUST00000098307 165 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx39aQ8VDW0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms