Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Gm5354-201ENSMUST00000182417 973 ntBASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Gm37917-201ENSMUST00000194711 392 ntBASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rprd1aQ8VDS4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rprd1aQ8VDS4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms