Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ndc1Q8VCB1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ndc1Q8VCB1 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.96□□□□□ -0.34
Ndc1Q8VCB1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ndc1Q8VCB1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Ndc1Q8VCB1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ndc1Q8VCB1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ndc1Q8VCB1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Gm15240-201ENSMUST00000118156 720 ntBASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ndc1Q8VCB1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ndc1Q8VCB1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms