Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Gm5779-201ENSMUST00000218467 910 ntBASIC13.26□□□□□ -0.29
Rnf8Q8VC56 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf8Q8VC56 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Gm6415-201ENSMUST00000118488 348 ntBASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf8Q8VC56 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms