Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm18054-201ENSMUST00000207539 555 ntBASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm45880-201ENSMUST00000213041 853 ntBASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp7Q8R1T1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Gm27682-201ENSMUST00000183930 110 ntBASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp7Q8R1T1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp7Q8R1T1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp7Q8R1T1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Chmp7Q8R1T1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms