Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Syt7-204ENSMUST00000223586 1344 ntBASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gm15321-201ENSMUST00000121290 288 ntBASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rfwd3Q8CIK8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Gm9522-201ENSMUST00000182394 926 ntBASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfwd3Q8CIK8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms