Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Gm29608-201ENSMUST00000190444 463 ntBASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Gm44719-201ENSMUST00000206404 149 ntBASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rdh1Q8CGV4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rdh1Q8CGV4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Gm38671-201ENSMUST00000200573 130 ntBASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rdh1Q8CGV4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rdh1Q8CGV4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms