Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Mir5133-201ENSMUST00000174955 77 ntBASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm2445-201ENSMUST00000182798 989 ntBASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hist3h2bbQ8CGP0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Timm23-208ENSMUST00000226683 750 ntBASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.31□□□□□ -0.76
Hist3h2bbQ8CGP0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms