Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.36□□□□□ -0.27
Rab43Q8CG50 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Gm42693-201ENSMUST00000196779 631 ntBASIC13.36□□□□□ -0.27
Rab43Q8CG50 Gm40466-201ENSMUST00000212174 422 ntBASIC13.36□□□□□ -0.27
Rab43Q8CG50 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.36□□□□□ -0.27
Rab43Q8CG50 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab43Q8CG50 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Gm12384-201ENSMUST00000119228 919 ntBASIC13.35□□□□□ -0.27
Rab43Q8CG50 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Gm43818-201ENSMUST00000200605 466 ntBASIC13.35□□□□□ -0.27
Rab43Q8CG50 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab43Q8CG50 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.34□□□□□ -0.27
Rab43Q8CG50 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Gm22331-201ENSMUST00000158066 136 ntBASIC13.34□□□□□ -0.27
Rab43Q8CG50 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms