Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Gm21362-201ENSMUST00000194272 928 ntBASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Gm5864-201ENSMUST00000202263 970 ntBASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc28bQ8CEG5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Gm13884-201ENSMUST00000118103 829 ntBASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Gm12350-201ENSMUST00000121208 462 ntBASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc28bQ8CEG5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Gm11543-201ENSMUST00000120758 370 ntBASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Rpph1-201ENSMUST00000175096 319 ntBASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Gm17968-201ENSMUST00000194902 784 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms