Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.21■□□□□ 0.18
Nup88Q8CEC0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup88Q8CEC0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup88Q8CEC0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup88Q8CEC0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.21■□□□□ 0.18
Nup88Q8CEC0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.21■□□□□ 0.18
Nup88Q8CEC0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup88Q8CEC0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm12490-201ENSMUST00000120255 560 ntBASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm7653-201ENSMUST00000214567 508 ntBASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm9229-201ENSMUST00000222777 126 ntBASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Grk6-205ENSMUST00000224653 2976 ntBASIC16.2■□□□□ 0.18
Nup88Q8CEC0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Gm20445-201ENSMUST00000061905 565 ntBASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup88Q8CEC0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.18■□□□□ 0.18
Nup88Q8CEC0 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nup88Q8CEC0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms