Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fam228aQ8CDW1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam228aQ8CDW1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Fam228aQ8CDW1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Fam228aQ8CDW1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Mir3113-201ENSMUST00000175478 76 ntBASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam228aQ8CDW1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Gm37714-201ENSMUST00000194742 342 ntBASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Gm5364-201ENSMUST00000216789 889 ntBASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.38□□□□□ -0.11
Fam228aQ8CDW1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms