Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm15429-201ENSMUST00000151268 798 ntBASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm9002-201ENSMUST00000178437 499 ntBASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm18187-201ENSMUST00000196476 984 ntBASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf31Q8CCF0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf31Q8CCF0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Gm2495-201ENSMUST00000191160 466 ntBASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Gm5161-201ENSMUST00000075243 853 ntBASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms