Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.05□□□□□ -0.32
Eri3Q8C460 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Eri3Q8C460 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Eri3Q8C460 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.05□□□□□ -0.32
Eri3Q8C460 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Eri3Q8C460 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Eri3Q8C460 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.04□□□□□ -0.32
Eri3Q8C460 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.04□□□□□ -0.32
Eri3Q8C460 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.04□□□□□ -0.32
Eri3Q8C460 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.04□□□□□ -0.32
Eri3Q8C460 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.04□□□□□ -0.32
Eri3Q8C460 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.04□□□□□ -0.32
Eri3Q8C460 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Eri3Q8C460 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.04□□□□□ -0.32
Eri3Q8C460 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Eri3Q8C460 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Eri3Q8C460 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Eri3Q8C460 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.03□□□□□ -0.32
Eri3Q8C460 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.03□□□□□ -0.32
Eri3Q8C460 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.03□□□□□ -0.32
Eri3Q8C460 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Eri3Q8C460 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Mir6977-201ENSMUST00000184960 64 ntBASIC13.03□□□□□ -0.32
Eri3Q8C460 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Gm44719-201ENSMUST00000206404 149 ntBASIC13.03□□□□□ -0.32
Eri3Q8C460 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.03□□□□□ -0.32
Eri3Q8C460 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Eri3Q8C460 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.03□□□□□ -0.32
Eri3Q8C460 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Eri3Q8C460 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms