Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc90bQ8C3X2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Gm9103-201ENSMUST00000119371 405 ntBASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Mir8098-201ENSMUST00000184011 137 ntBASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc90bQ8C3X2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Mir5131-201ENSMUST00000175426 93 ntBASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Mir5126-201ENSMUST00000175513 77 ntBASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Gm5864-201ENSMUST00000202263 970 ntBASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc90bQ8C3X2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc90bQ8C3X2 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms