Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Gm11400-201ENSMUST00000120853 1214 ntBASIC19.25■□□□□ 0.67
Usp47Q8BY87 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Gm6091-201ENSMUST00000098307 165 ntBASIC19.25■□□□□ 0.67
Usp47Q8BY87 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp47Q8BY87 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Gm10156-201ENSMUST00000122364 462 ntBASIC19.24■□□□□ 0.67
Usp47Q8BY87 Gm8810-201ENSMUST00000172895 754 ntBASIC19.24■□□□□ 0.67
Usp47Q8BY87 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC19.24■□□□□ 0.67
Usp47Q8BY87 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp47Q8BY87 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Gm14752-201ENSMUST00000120719 2075 ntBASIC19.23■□□□□ 0.67
Usp47Q8BY87 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 AC166491.1-201ENSMUST00000227053 2308 ntBASIC19.23■□□□□ 0.67
Usp47Q8BY87 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp47Q8BY87 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Gm14350-201ENSMUST00000116642 640 ntBASIC19.22■□□□□ 0.67
Usp47Q8BY87 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC19.22■□□□□ 0.67
Usp47Q8BY87 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp47Q8BY87 Gm18630-201ENSMUST00000222109 1397 ntBASIC19.22■□□□□ 0.67
Usp47Q8BY87 Gm10710-201ENSMUST00000047876 3971 ntBASIC19.22■□□□□ 0.67
Usp47Q8BY87 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms