Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Gm24543-201ENSMUST00000103867 82 ntBASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Gm13453-201ENSMUST00000118708 357 ntBASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Gm17837-201ENSMUST00000186435 985 ntBASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Gm6888-201ENSMUST00000221983 706 ntBASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trerf1Q8BXJ2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Gm14057-201ENSMUST00000120631 482 ntBASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Gm12882-201ENSMUST00000121696 517 ntBASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Gm27306-201ENSMUST00000183970 107 ntBASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trerf1Q8BXJ2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Mir1897-201ENSMUST00000122581 272 ntBASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Gm27533-201ENSMUST00000183800 152 ntBASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Dupd1-202ENSMUST00000224735 548 ntBASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Shd-206ENSMUST00000225145 998 ntBASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms