Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Gm3436-201ENSMUST00000179930 840 ntBASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Gm43703-201ENSMUST00000200523 763 ntBASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ube3dQ8BX13 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Gm4875-201ENSMUST00000118257 786 ntBASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Gm44855-201ENSMUST00000205725 362 ntBASIC12.21□□□□□ -0.45
Ube3dQ8BX13 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Gm9229-201ENSMUST00000222777 126 ntBASIC12.21□□□□□ -0.45
Ube3dQ8BX13 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube3dQ8BX13 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Syt7-205ENSMUST00000224135 1557 ntBASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ube3dQ8BX13 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 134.8 ms