Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.02□□□□□ -0.16
Nup54Q8BTS4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Gm17330-201ENSMUST00000221047 165 ntBASIC14.02□□□□□ -0.17
Nup54Q8BTS4 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup54Q8BTS4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm13689-201ENSMUST00000119360 685 ntBASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm12138-201ENSMUST00000122180 951 ntBASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm27701-201ENSMUST00000184498 110 ntBASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm45384-201ENSMUST00000210451 277 ntBASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup54Q8BTS4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Nup54Q8BTS4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm12626-201ENSMUST00000117339 1983 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm12623-201ENSMUST00000119849 1983 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14□□□□□ -0.17
Nup54Q8BTS4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm16342-201ENSMUST00000124025 1025 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nup54Q8BTS4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms