Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm12176-201ENSMUST00000121420 875 ntBASIC19.14■□□□□ 0.65
Usp54Q8BL06 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC19.14■□□□□ 0.65
Usp54Q8BL06 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm38297-201ENSMUST00000195122 1057 ntBASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm38317-201ENSMUST00000195564 343 ntBASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm9004-201ENSMUST00000218739 1222 ntBASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm18615-201ENSMUST00000222919 1031 ntBASIC19.14■□□□□ 0.65
Usp54Q8BL06 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp54Q8BL06 AC167669.2-201ENSMUST00000224417 1620 ntBASIC19.12■□□□□ 0.65
Usp54Q8BL06 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Gm19221-201ENSMUST00000221827 1477 ntBASIC19.12■□□□□ 0.65
Usp54Q8BL06 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Gm43273-201ENSMUST00000199649 2594 ntBASIC19.12■□□□□ 0.65
Usp54Q8BL06 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp54Q8BL06 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Gm11531-201ENSMUST00000117614 555 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 Gm17208-201ENSMUST00000168388 535 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 Gm16505-201ENSMUST00000179981 232 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 AA914427-201ENSMUST00000193194 1166 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 Gm18753-201ENSMUST00000201000 566 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 CT025533.2-201ENSMUST00000228715 1248 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Gm8228-201ENSMUST00000189949 2192 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Gm8862-201ENSMUST00000198379 1346 ntBASIC19.11■□□□□ 0.65
Usp54Q8BL06 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp54Q8BL06 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp54Q8BL06 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp54Q8BL06 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp54Q8BL06 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC19.1■□□□□ 0.65
Usp54Q8BL06 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp54Q8BL06 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp54Q8BL06 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp54Q8BL06 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp54Q8BL06 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms