Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm5566-201ENSMUST00000116118 459 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm13365-201ENSMUST00000121188 973 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm9824-201ENSMUST00000178707 561 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm18766-201ENSMUST00000189811 808 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Mir497b-201ENSMUST00000093601 125 ntBASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Gm9719-201ENSMUST00000162765 543 ntBASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Gm29541-201ENSMUST00000191351 678 ntBASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdhr3Q8BL00 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gm25287-201ENSMUST00000103846 110 ntBASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gm22918-201ENSMUST00000103855 110 ntBASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Mir1895-201ENSMUST00000122615 79 ntBASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gm25911-201ENSMUST00000157621 56 ntBASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdhr3Q8BL00 Gm6916-202ENSMUST00000205523 195 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms