Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Srrm4Q8BKA3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Srrm4Q8BKA3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Gm22189-201ENSMUST00000103822 86 ntBASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Gm6218-201ENSMUST00000219812 628 ntBASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.9□□□□□ -0.5
Srrm4Q8BKA3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Srrm4Q8BKA3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Srrm4Q8BKA3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Srrm4Q8BKA3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Srrm4Q8BKA3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gm7488-201ENSMUST00000117148 684 ntBASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gm9797-201ENSMUST00000052902 613 ntBASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srrm4Q8BKA3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srrm4Q8BKA3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms