Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Gm5779-201ENSMUST00000218467 910 ntBASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Dupd1-202ENSMUST00000224735 548 ntBASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc40Q8BI79 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc40Q8BI79 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Pck2-205ENSMUST00000226352 2784 ntBASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Gm24543-201ENSMUST00000103867 82 ntBASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Gm6415-201ENSMUST00000118488 348 ntBASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Gm16476-201ENSMUST00000221544 139 ntBASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms