Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Gm44719-201ENSMUST00000206404 149 ntBASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 AV026068-213ENSMUST00000223675 1171 ntBASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Gm7153-201ENSMUST00000117092 455 ntBASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Gm18669-201ENSMUST00000216049 778 ntBASIC12□□□□□ -0.49
Slc5a7Q8BGY9 AC139350.3-201ENSMUST00000226151 420 ntBASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc5a7Q8BGY9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Gm27920-201ENSMUST00000183953 96 ntBASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Thap2-203ENSMUST00000218989 527 ntBASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms