Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Gm1401-201ENSMUST00000122048 772 ntBASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Mir3113-201ENSMUST00000175478 76 ntBASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim6Q8BGE7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm2810-201ENSMUST00000118681 990 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm2445-201ENSMUST00000182798 989 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm29310-201ENSMUST00000185468 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21825-201ENSMUST00000185728 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm29109-201ENSMUST00000185895 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21896-201ENSMUST00000186520 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21873-201ENSMUST00000186728 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21794-201ENSMUST00000187056 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21880-201ENSMUST00000187275 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21826-201ENSMUST00000187451 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21198-201ENSMUST00000188393 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21749-201ENSMUST00000189343 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21901-201ENSMUST00000189568 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm29424-201ENSMUST00000189716 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm28599-201ENSMUST00000189838 694 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21867-201ENSMUST00000189917 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm29269-201ENSMUST00000190087 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21722-201ENSMUST00000190153 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm28423-201ENSMUST00000190701 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21899-201ENSMUST00000190745 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21910-201ENSMUST00000191163 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21849-201ENSMUST00000191571 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm28678-201ENSMUST00000191593 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm20910-201ENSMUST00000193268 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gm21871-201ENSMUST00000194621 696 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim6Q8BGE7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms