Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trim62Q80V85 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim62Q80V85 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.19□□□□□ -0.14
Trim62Q80V85 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim62Q80V85 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim62Q80V85 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Gm7063-201ENSMUST00000186840 981 ntBASIC14.18□□□□□ -0.14
Trim62Q80V85 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.18□□□□□ -0.14
Trim62Q80V85 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim62Q80V85 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim62Q80V85 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.17□□□□□ -0.14
Trim62Q80V85 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim62Q80V85 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.17□□□□□ -0.14
Trim62Q80V85 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim62Q80V85 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim62Q80V85 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.16□□□□□ -0.14
Trim62Q80V85 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.16□□□□□ -0.14
Trim62Q80V85 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms