Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm22065-201ENSMUST00000103753 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm22066-201ENSMUST00000103761 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24932-201ENSMUST00000103763 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24115-201ENSMUST00000103799 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm22190-201ENSMUST00000103827 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm22191-201ENSMUST00000103831 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24721-201ENSMUST00000103849 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm28018-201ENSMUST00000103869 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm26399-201ENSMUST00000103937 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm14822-201ENSMUST00000122247 291 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm25349-201ENSMUST00000177728 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm23616-201ENSMUST00000177797 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm25871-201ENSMUST00000177816 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24752-201ENSMUST00000178240 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24496-201ENSMUST00000178287 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm25649-201ENSMUST00000178476 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm25548-201ENSMUST00000178681 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm23147-201ENSMUST00000178841 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm26095-201ENSMUST00000179270 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm22171-201ENSMUST00000179283 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm23936-201ENSMUST00000179354 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm22619-201ENSMUST00000179516 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm25255-201ENSMUST00000179579 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24755-201ENSMUST00000179691 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm26506-201ENSMUST00000179692 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm25086-201ENSMUST00000179931 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm23243-201ENSMUST00000180047 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24659-201ENSMUST00000180212 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm24169-201ENSMUST00000180244 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm23689-201ENSMUST00000180354 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm27359-201ENSMUST00000184153 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm27785-201ENSMUST00000184268 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm27466-201ENSMUST00000184396 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm27703-201ENSMUST00000184836 110 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm2756-201ENSMUST00000195851 400 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm44335-201ENSMUST00000196879 141 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm44297-201ENSMUST00000198304 141 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm44346-201ENSMUST00000198851 141 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.78□□□□□ -0.2
Usp8Q80U87 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.78□□□□□ -0.2
Usp8Q80U87 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Usp8Q80U87 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Gm43474-201ENSMUST00000196415 774 ntBASIC13.78□□□□□ -0.2
Usp8Q80U87 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.78□□□□□ -0.2
Usp8Q80U87 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.78□□□□□ -0.2
Usp8Q80U87 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp8Q80U87 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp8Q80U87 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms