Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn4bQ7M729 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn4bQ7M729 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.36□□□□□ -0.27
Scn4bQ7M729 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gm4875-201ENSMUST00000118257 786 ntBASIC13.36□□□□□ -0.27
Scn4bQ7M729 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Mir7023-201ENSMUST00000185093 64 ntBASIC13.36□□□□□ -0.27
Scn4bQ7M729 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.36□□□□□ -0.27
Scn4bQ7M729 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.36□□□□□ -0.27
Scn4bQ7M729 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.36□□□□□ -0.27
Scn4bQ7M729 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn4bQ7M729 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms