Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scaf4Q6PFF0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Mir125a-201ENSMUST00000083545 68 ntBASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Mir497b-201ENSMUST00000093601 125 ntBASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scaf4Q6PFF0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scaf4Q6PFF0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Syt7-205ENSMUST00000224135 1557 ntBASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scaf4Q6PFF0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scaf4Q6PFF0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms