Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop58Q6DFW4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nop58Q6DFW4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop58Q6DFW4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Mypopos-202ENSMUST00000205975 2321 ntBASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Gm5385-201ENSMUST00000118988 1559 ntBASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nop58Q6DFW4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Gm43347-201ENSMUST00000200226 580 ntBASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 AV026068-213ENSMUST00000223675 1171 ntBASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop58Q6DFW4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Nudt18-202ENSMUST00000228554 3619 ntBASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Gm15957-201ENSMUST00000118893 974 ntBASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop58Q6DFW4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.86■□□□□ 0.61
Nop58Q6DFW4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Gm9385-201ENSMUST00000117563 472 ntBASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.86■□□□□ 0.61
Nop58Q6DFW4 Gm27920-201ENSMUST00000183953 96 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms