Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.17■□□□□ 0.18
Ctr9Q62018 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.17■□□□□ 0.18
Ctr9Q62018 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.17■□□□□ 0.18
Ctr9Q62018 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.17■□□□□ 0.18
Ctr9Q62018 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.17■□□□□ 0.18
Ctr9Q62018 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.17■□□□□ 0.18
Ctr9Q62018 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ctr9Q62018 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.17■□□□□ 0.18
Ctr9Q62018 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ctr9Q62018 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
Ctr9Q62018 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.16■□□□□ 0.18
Ctr9Q62018 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.16■□□□□ 0.18
Ctr9Q62018 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.16■□□□□ 0.18
Ctr9Q62018 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.16■□□□□ 0.18
Ctr9Q62018 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ctr9Q62018 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ctr9Q62018 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.15■□□□□ 0.18
Ctr9Q62018 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.15■□□□□ 0.18
Ctr9Q62018 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Gm11478-201ENSMUST00000117851 599 ntBASIC16.15■□□□□ 0.18
Ctr9Q62018 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.15■□□□□ 0.18
Ctr9Q62018 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.15■□□□□ 0.18
Ctr9Q62018 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.15■□□□□ 0.18
Ctr9Q62018 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ctr9Q62018 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ctr9Q62018 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.15■□□□□ 0.18
Ctr9Q62018 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
Ctr9Q62018 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ctr9Q62018 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ctr9Q62018 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ctr9Q62018 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms