Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.24□□□□□ -0.77
Foxc1Q61572 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.24□□□□□ -0.77
Foxc1Q61572 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC10.23□□□□□ -0.77
Foxc1Q61572 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Gm13453-201ENSMUST00000118708 357 ntBASIC10.23□□□□□ -0.77
Foxc1Q61572 Gm4732-201ENSMUST00000118778 473 ntBASIC10.23□□□□□ -0.77
Foxc1Q61572 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Gm27437-201ENSMUST00000183429 107 ntBASIC10.23□□□□□ -0.77
Foxc1Q61572 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.23□□□□□ -0.77
Foxc1Q61572 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.23□□□□□ -0.77
Foxc1Q61572 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Foxc1Q61572 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.23□□□□□ -0.77
Foxc1Q61572 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.23□□□□□ -0.77
Foxc1Q61572 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm14301-201ENSMUST00000120181 324 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm12372-201ENSMUST00000121654 768 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm11424-201ENSMUST00000121929 829 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms