Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.04■□□□□ -0
Col11a1Q61245 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.04■□□□□ -0
Col11a1Q61245 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.04■□□□□ -0
Col11a1Q61245 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.03■□□□□ -0
Col11a1Q61245 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.03■□□□□ -0
Col11a1Q61245 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.03■□□□□ -0
Col11a1Q61245 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.03■□□□□ -0
Col11a1Q61245 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Gm13875-201ENSMUST00000120162 282 ntBASIC15.03■□□□□ -0
Col11a1Q61245 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.03■□□□□ -0
Col11a1Q61245 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.03■□□□□ -0
Col11a1Q61245 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.03■□□□□ -0
Col11a1Q61245 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a1Q61245 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.03■□□□□ -0
Col11a1Q61245 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.02■□□□□ -0
Col11a1Q61245 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Col11a1Q61245 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.02■□□□□ -0
Col11a1Q61245 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.02■□□□□ -0
Col11a1Q61245 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.02■□□□□ -0
Col11a1Q61245 Gm5523-201ENSMUST00000180415 997 ntBASIC15.02■□□□□ -0
Col11a1Q61245 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.02■□□□□ -0
Col11a1Q61245 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.02■□□□□ -0
Col11a1Q61245 Gm44126-201ENSMUST00000204831 514 ntBASIC15.02■□□□□ -0
Col11a1Q61245 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.02■□□□□ -0
Col11a1Q61245 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.02■□□□□ -0
Col11a1Q61245 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.02■□□□□ -0
Col11a1Q61245 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a1Q61245 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a1Q61245 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a1Q61245 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col11a1Q61245 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a1Q61245 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a1Q61245 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.02□□□□□ -0.01
Col11a1Q61245 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a1Q61245 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col11a1Q61245 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.01□□□□□ -0.01
Col11a1Q61245 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.01□□□□□ -0.01
Col11a1Q61245 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Gm44100-201ENSMUST00000204329 436 ntBASIC15.01□□□□□ -0.01
Col11a1Q61245 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col11a1Q61245 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a1Q61245 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms