Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Gm26464-201ENSMUST00000157094 305 ntBASIC14.59□□□□□ -0.07
Shroom1Q5SX79 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Shroom1Q5SX79 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shroom1Q5SX79 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shroom1Q5SX79 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shroom1Q5SX79 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Gm15429-201ENSMUST00000151268 798 ntBASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms