Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm11918-201ENSMUST00000121660 179 ntBASIC16.45■□□□□ 0.22
Vps54Q5SPW0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Gm28911-201ENSMUST00000188837 117 ntBASIC16.45■□□□□ 0.22
Vps54Q5SPW0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm27701-201ENSMUST00000184498 110 ntBASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm5161-201ENSMUST00000075243 853 ntBASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm24447-201ENSMUST00000083977 338 ntBASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps54Q5SPW0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Gm2495-201ENSMUST00000191160 466 ntBASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps54Q5SPW0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Gm29608-201ENSMUST00000190444 463 ntBASIC16.42■□□□□ 0.22
Vps54Q5SPW0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms