Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm11543-201ENSMUST00000120758 370 ntBASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm24589-201ENSMUST00000116692 94 ntBASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm29741-201ENSMUST00000192667 421 ntBASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms