Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Gm12620-201ENSMUST00000119791 1986 ntBASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Gm12612-201ENSMUST00000140182 1986 ntBASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Trim41Q5NCC3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.39
Trim41Q5NCC3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Gm37297-201ENSMUST00000192974 2384 ntBASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Gm10156-201ENSMUST00000122364 462 ntBASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Gm27438-201ENSMUST00000183480 110 ntBASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Gm38158-201ENSMUST00000194617 339 ntBASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Gm17870-201ENSMUST00000219489 1174 ntBASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim41Q5NCC3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Gm15770-201ENSMUST00000117498 584 ntBASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Gm42627-201ENSMUST00000197347 224 ntBASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Gm8959-201ENSMUST00000213150 571 ntBASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Itm2b-204ENSMUST00000228637 783 ntBASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim41Q5NCC3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Gm8213-201ENSMUST00000118191 441 ntBASIC23.68■■□□□ 1.38
Trim41Q5NCC3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Trim41Q5NCC3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Gm8810-201ENSMUST00000172895 754 ntBASIC23.67■■□□□ 1.38
Trim41Q5NCC3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms